Currently it is very difficult to investigate which open source solutions are available for clinical study evaluations. There are quite some lists available for open source R programs. PhUSE has a R-Shiny App to display the PhUSE content. But still it is very tough to investigate what is available, especially when searching for a specific area.
This page will be a link collection of open source solutions, programs and scripts for clinical study evaluations. Additional metadata will be stored and a user friendly search mask as well as different navigations are made available.
The content is collected manually. Further information and metadata are derived according available metadata and header analysis. If you want to provide additional input, please get in touch with me via email@example.com. Additional content, views and also edit facilities will be added in the future.
To support this project, you can do a donation or become a sponsor of this webpage. There are many plans for further enhancements and enrichment of this portal. Apart from updating the page to allow many interactions like ratings and user edits, the content should also be enriched by including additionally available open source as well as making hidden open source jewels available and findable. The SAS(R) support pages contains for example quite some useful macros. Furthermore valueable macros could be derived from papers, when the copyright-owner allows this.
Additionally it is planned to develop a process and macros for managing and downloading open source SAS macros and scripts to allow something similar and easy like install.packages("package name") for easy use.
You can support the open source portal with a donation or by becoming a sponsor. The advantages of sponsorship are that your logo will be made available on the portal page it be mentioned in all communications delivered by Katja Glass Consulting relating to the portal. If you are interested, get in touch with me (firstname.lastname@example.org) or press the button below for a donation through PayPal.
The eBook 'R for CSR and Submission' has been included into the tools. Elsewise I am waiting for the following huge tools to get live which are CORE, DDF and the OpenStudyBuilder!
There is now a new article section and a connected GitHub to allow others to contribute content to the portal (clinicalOpenSourcePortal). Also check-out the new FHIRLOINC2SDTM tool to map FHIR to SDTM!
Admiral and ODMLib have been added. More -> Articles is a new section which will have soon an option to contain articles from various contributors. The RinPharma videos has also been added (More -> Conf. Videos).
More -> Conf. Videos shows links to available conferenve videos. Then 30 table creation R scripts from 'CDISC Pilot Replication in R' project has been added. Admiral is added under links - waiting for the release as open source after test phase to fully include this project.
Vignettes for R Packages has been added into the documentation. Furthermore the table displays are updated to use infinitive scrolling. The TPLYR, PharmaRTF, R2RTF and ModVizPop packages have been included as well as nice TTE_ANIMATION scripts.
A first Python tool has been included (eudract_ae)! Additionally PODR, ToxSummary and Valtools has been added. Links has been updated to inlcude also PHUSE PODR and RValidation hub, which are nice to know.